BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D09LP1|AL424960
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 1611 0.0
>3x_Contig1781
Length = 20717
Score = 1611 bits (812), Expect = 0.0
Identities = 827/830 (99%), Gaps = 2/830 (0%)
Strand = Plus / Plus
Query: 1 ttctactggagaagcaaaaatgccaaaggcgatccgacgtgggaagggaccagtgccgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17837 ttctactggagaagcaaaaatgccaaaggcgatccgacgtgggaagggaccagtgccgtt 17896
Query: 61 cataccaacatgaccaacacaagaatgaccgatgtggagatcttcgaaagacattatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17897 cataccaacatgaccaacacaagaatgaccgatgtggagatcttcgaaagacattatcct 17956
Query: 121 gtaatcttgcgtcagtttgcaataagaaaggcgtctggcggtgtgggcaaattccgtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17957 gtaatcttgcgtcagtttgcaataagaaaggcgtctggcggtgtgggcaaattccgtgga 18016
Query: 181 gggaatggtgtcattcgagaagtggaatttacagaacaagtgcaagcttcaatcctttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18017 gggaatggtgtcattcgagaagtggaatttacagaacaagtgcaagcttcaatcctttca 18076
Query: 241 gagagaagagttcatccgcctaatggactccaaggtggtggtgatggagaaagaggaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18077 gagagaagagttcatccgcctaatggactccaaggtggtggtgatggagaaagaggaatg 18136
Query: 301 aacctgtggataagaggaggaggaagtgaagacaccgaag-ttccattgtgaacttggga 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 18137 aacctgtggataagaggaggaggaagtgaagacaccgaaggttccattgtgaacttggga 18196
Query: 360 ggtaagaacaccgttatgatgcgtcctggagataagatcgtgatccagactccaggcggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18197 ggtaagaacaccgttatgatgcgtcctggagataagatcgtgatccagactccaggcggt 18256
Query: 420 ggcggctatggatgtgcctctgagttataatcagtttagtcacatgcgattgtcaacgat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18257 ggcggctatggatgtgcctctgagttataatcagtttagtcacatgcgattgtcaacgat 18316
Query: 480 gaaccatgaatcacgaaccacaaacctatttcctgcttcttattacctgttaatactgta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18317 gaaccatgaatcacgaaccacaaacctatttcctgcttcttattacctgttaatactgta 18376
Query: 540 cctttctcaaataagactccgtcagctccttggctaaagtccgcttccctatatccttct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18377 cctttctcaaataagactccgtcagctccttggctaaagtccgcttccctatatccttct 18436
Query: 600 accctagaaaaaggcgctctgcatgcacgatgttctcgttcgagccacaatcttcgcttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18437 accctagaaaaaggcgctctgcatgcacgatgttctcgttcgagccacaatcttcgcttt 18496
Query: 660 ccacattgcatgatattcccgatcctgcgcatgtttctgtgtatcgtctcgaggccaaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18497 ccacattgcatgatattcccgatcctgcgcatgtttctgtgtatcgtctcgaggccaaaa 18556
Query: 720 gaaacaaccacaaaaacacc-aaaaaaaaaaaaaaaaaagagagaatgcctctctgccca 778
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 18557 gaaacaaccacaaaaacaccaaaaaaaaaaaaaaaaaaagagagaatgcctctctgccca 18616
Query: 779 ggcacttaattgcccctcgccttctccgaggsgatccttgaagctttaac 828
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 18617 ggcacttaattgcccctcgccttctccgaggcgatccttgaagctttaac 18666
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,977
Number of Sequences: 1807
Number of extensions: 16977
Number of successful extensions: 3178
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)